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Gajdzik L, Ingeman K, Kindinger TL, Oliver T. 2023. Spatiotemporal trends in benthic and reef fish communities in the Mariana Archipelago. U.S. Dept. of Commerce, NOAA Technical Memorandum NMFS-PIFSC-152, 45p. 45. doi:10.25923/7efh-qt23</gco:CharacterString>
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            <gco:CharacterString>Gajdzik L, Ingeman K, Kindinger TL, Oliver T. 2023. Spatiotemporal trends in benthic and reef fish communities in the Mariana Archipelago. U.S. Dept. of Commerce, NOAA Technical Memorandum NMFS-PIFSC-152, 45p. 45. doi:10.25923/7efh-qt23

University of Guam Marine Laboratory (2019). Guam Long-term Coral Reef Monitoring Program Benthic Images since 2010. NOAA's National Center for Environmental Information, https://www.fisheries.noaa.gov/inport/item/47788.

Pacific Islands Fisheries Science Center, 2024: National Coral Reef Monitoring Program: Benthic Cover Derived from Analysis of Benthic Images Collected during Stratified Random Surveys (StRS) across the Mariana Archipelago since 2014, https://www.fisheries.noaa.gov/inport/item/36156.

Pacific Islands Fisheries Science Center, 2024: National Coral Reef Monitoring Program: Benthic Images Collected from Stratified Random Sites (StRS) across the Mariana Archipelago since 2014, https://www.fisheries.noaa.gov/inport/item/36153.

Pacific Islands Fisheries Science Center, 2024: Pacific Reef Monitoring and Assessment Program: Line-Point-Intercept (LPI) Surveys for Benthic Cover at Coral Reef Sites across the Pacific Ocean from 2005 to 2012, https://www.fisheries.noaa.gov/inport/item/25261.

Pacific Islands Fisheries Science Center, 2024: National Coral Reef Monitoring Program: Benthic Cover from Annotated Benthic Images Collected During Photoquadrat Surveys at Climate Stations across the Mariana Archipelago since 2014, https://www.fisheries.noaa.gov/inport/item/36147.

Perez, D.I., Camacho, R., Hasegawa, K., Iguel, J., Suel, J., David, P. (2021). CNMI State of the Reef Report  2020-2021. Division of Coastal Resources Management, Bureau of Environmental and Coastal Quality, Commonwealth of the Northern Mariana Islands.</gco:CharacterString>
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        <gco:CharacterString>The benthic percent cover data described in this record is a result of a synthesizing effort led by the Ecosystem Sciences Division (ESD) to integrate benthic cover data collected during the National Coral Reef Monitoring Program (NCRMP) surveys in the Mariana Islands Archipelago with surveys carried out by jurisdictional partners in Guam and the Commonwealth of the Northern Mariana Islands (CNMI). This project covers a period of over 20 years (2000-2022) and was funded by the CRCP Project #31364, titled "Synthesizing data to assess temporal trends in benthic and reef fish communities across the Mariana archipelago".

Benthic percent cover was estimated for six categories (i.e., calcified, non-calcified, algae, turf, crustose coralline algae, and coral) and produced at three spatial scales: across the archipelago (populated islands versus remote islands), at each  populated island (Guam, Rota, Tinian, and Saipan) and some remote islands, and for each downscaled sectors (10 sectors in Guam, four in Rota, four in Tinian, and 9 in Saipan). These estimates were primarily generated from benthic substrate photographs and using the line-point intercept methodology. Benthic substrate photographs are commonly taken along a 30-m transect at every meter at each site and are then analyzed using the web-based annotation tool. The line-point-intercept methodology consists of consecutively placing 25-m line transects (with a usually 5-m inter-transect distance) to determine the benthic composition at predetermined intervals along the transect line.</gco:CharacterString>
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        <gco:CharacterString>The National Coral Reef Monitoring Program (NCRMP) was explicitly designed to summarize coral reef site-level data at the regional and island scales. While the results are geographically comprehensive, this sampling design limits the utility of the NCRMP dataset to inform local resource management decisions at sub-island scales. Accordingly, managers typically rely on smaller-scale efforts that trade spatial comprehensiveness for finer spatiotemporal resolution. To reconcile managers' scale of interest and better leverage NCRMP data, we present an effort to integrate NCRMP with local coral reef Monitoring data to assess the temporal variation in fish and benthic communities over the last two decades. We identified common community metrics from all monitoring programs, compared these metrics between populated and remote islands, and analyzed their trends at the island- and downscaled sector-scales (sub-island spatial units that are homogeneous in benthic cover).

Our integrated benthic data set (from NCRMP and our jurisdictional monitoring programs) resulted in 2,298 observations from 1,800 unique locations across the Marianas and spanned over two decades (2000-2022). From these data, we observed a general decline in hard coral cover which was accompanied by a substantial increase in turf algae across the archipelago. These trends were present at smaller spatial scales (islands and sectors). Specifically, coral cover significantly declined at three of the four populated islands and in 50% of the sectors. When gauging resilience, our results revealed evidence of reef resistance for some sectors, which represent potential good candidates for resilience-based spatial management. Overall, this project combined different data streams, covered a wide spatiotemporal scale, and employed a spatial downscaling approach to unveil patterns of resilience at management-relevant scales.</gco:CharacterString>
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            <gco:CharacterString>Only good images of the benthos (for the photoquadrat methods) were kept and those with poor resolution, poor lighting, extraneous objects (fins, etc), or blur were excluded from analysis. For the line-intercept points, the benthic cover parameter observations were made by trained divers.</gco:CharacterString>
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            <gco:CharacterString>Image data include ~30 benthic photographs per survey site. The diver teams conduct the photoquadrat surveys along one 30-m transect. Appropriate site level image grouping should include all 30 images.</gco:CharacterString>
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            <gco:CharacterString>Only photoquadrats and line-point intercept methods of data collection were used at each surveyed site and coarse benthic cover estimates were computed from those data.</gco:CharacterString>
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            <gco:CharacterString>Estimates of benthic cover were primarily generated from benthic substrate photographs (hereafter referred to as âphotoquadratsâ) and using the line-point intercept methodology. Photoquadrats are commonly taken along a 30-m transect at every meter at each site. The benthic photoquadrat imagery is then analyzed using the web-based annotation tool such as CoralNet; generally 10 random points are selected per photo. The line-point-intercept methodology consists of consecutively placing 25-m line transects (with a usually 5-m inter-transect distance) to determine the benthic composition at pre-determined intervals along the transect line. All living benthic elements (e.g., coral, algae, and other sessile invertebrates) are identified to the lowest taxonomic level possible, often substituting functional group categories for turf algae and crustose coralline algae.
The resulting list of datasets was then summarized on relatively coarse metrics of benthic functional groups (i.e., benthic % cover) that allowed us to retain the maximum number of data sets. Where raw data included sub-samples within sites (e.g., multiple, non-independent transects at a single study site), site-level means were calculated to ensure comparability among data sets. Individual data sets were then compiled into a common format with percent cover of (i) hard coral (strictly scleractinian live corals), (ii) macroalgae (excluding turf), (iii) turf, and (iv) crustose coralline algae (CCA). In addition to these functional groupings, we also investigated trajectories and trends over time between calcified cover (i.e., corals, CCA, and other calcifiers such as Halimeda algae) and non-calcified cover (non-calcifying algae, sponges, and other non-calcified living substrates, excluding pavement, rock, sand, and other non-living substrates).</gco:CharacterString>
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                <gco:CharacterString>Source Contribution: Data sources from this synthesizing project of benthic data followed the SOP for collecting benthic cover data from photoquadrat imagery using CoralNet.</gco:CharacterString>
              </gmd:description>
              <gmd:sourceCitation>
                <gmd:CI_Citation>
                  <gmd:title>
                    <gco:CharacterString>Lozada-Misa P, Schumacher BD, Vargas-Angel B. 2017. Analysis of benthic survey images via CoralNet : a summary of standard operating procedures and guidelines. Pacific Islands Fisheries Science Center, PIFSC Administrative Report, H-17-02, 169 p.</gco:CharacterString>
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                        <gco:Date>2017-01-31</gco:Date>
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                                <gmd:URL>https://doi.org/10.7289/V5/AR-PIFSC-H-17-02</gmd:URL>
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            <gmd:LI_Source>
              <gmd:description>
                <gco:CharacterString>Source Contribution: Data sources from this synthesizing project of benthic data followed the SOP for collecting benthic cover data using the photo-quadrat method.</gco:CharacterString>
              </gmd:description>
              <gmd:sourceCitation>
                <gmd:CI_Citation>
                  <gmd:title>
                    <gco:CharacterString>Ecosystem Sciences Division Standard Operating Procedures: Data Collection for Rapid Ecological Assessment Benthic Surveys, 2019 Update</gco:CharacterString>
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                        <gco:Date>2020-02-01</gco:Date>
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                        <gco:CharacterString>Courtney Couch</gco:CharacterString>
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                                <gmd:URL>https://repository.library.noaa.gov/view/noaa/23951</gmd:URL>
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                                <gco:CharacterString>Winston W, Couch C, Huntington B, Vargas-Angel B. 2020. Ecosystem Sciences Division standard operating procedures: data collection for rapid ecological assessment benthic surveys, 2019 update. NOAA Tech. Memo. NMFS-PIFSC-96, 56 p.</gco:CharacterString>
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                    <gco:CharacterString>Pacific Islands Fisheries Science Center, 2024: Pacific Reef Monitoring and Assessment Program: Line-Point-Intercept (LPI) Surveys for Benthic Cover at Coral Reef Sites across the Pacific Ocean from 2005 to 2012.</gco:CharacterString>
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