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        <gco:CharacterString>The calcification rate data described here are derived from calcification accretion units (CAUs) that were retrieved from fixed climate survey sites located in coral reef habitats during the NOAA Pacific Islands Fisheries Science Center (PIFSC), Ecosystem Sciences Division (ESD) led United States Agency for International Development (USAID) mission to Timor-Leste in 2014. CAUs are PVC settlement plates that facilitate the recruitment and colonization of crustose coralline algae, hard corals, and other reef calcifiers. Laboratory experiments show that CCA and coral calcification rates are strongly correlated with seawater chemistry, and changes in carbonate chemistry conditions due to ocean acidification could lead to reduced calcification and accretion rates and ecological phase shifts in coral reef communities.

Coral reef calcium carbonate accretion rates can be estimated by measuring the change in weight of the CAUs between deployment and retrieval. Monitoring net accretion over successive deployments allows for the detection of changes in reef calcification rates over time. Five units were deployed on the seafloor at each CAU site for 2 years. The number of processed CAUs for a site may be less than the number deployed, either because the units were lost or damaged at sea and therefore not recovered, or in rare instances, due to errors during laboratory processing.

This study provides information about spatial and temporal patterns of reef carbonate calcification and accretion rates and serves as a basis for detecting changes associated with changing seawater chemistry due to ocean acidification. These data can also be used in comparative analyses across natural gradients, thereby assisting efforts to determine whether key reef-building taxa can acclimatize to changing oceanographic environments. These data will have immediate, direct impacts on predictions of reef resilience in a higher carbon dioxide (CO2) world and on the design of reef management strategies.</gco:CharacterString>
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        <gco:CharacterString>In 2011, NOAA and the United States Agency for International Development (USAID) Timor-Leste Mission formed a 5-year bi-lateral partnership agreement from 2012 to 2016, in support of the Government of Timor-Leste, particularly the Ministry of Agriculture and Fisheries (MAF), by addressing significant information gaps in their nearshore marine ecosystems. Specifically, MAF asked NOAA to address the following questions:

1.Where are the nearshore marine resources?

2.What are the nearshore marine resources?

3.How are they changing over time and what threats are potentially causing these changes?

4.What approaches are needed to manage and conserve the nearshore marine resources?

With financial support from USAID and in-kind support from the NOAA Coral Reef Conservation Program (CRCP), the NOAA Ecosystem Sciences Division (ESD) conducted baseline ecosystem assessment surveys to inform ecosystem-based management planning in Timor-Leste. The primary activities conducted by NOAA to answer these questions included:

1.satellite mapping of nearshore habitats,

2.conducting coral reef ecosystem assessments,

3.establishing ecological baselines for climate change, and

4.building management capacity by developing a spatial data framework

The calcification rate data described herein resulted from the third activity to establish ecological baselines for climate change. CAU data collected herein can be used to establish calcium carbonate accretion rate baselines and assess change in reef accretion rates due to ocean acidification and other environmental drivers.</gco:CharacterString>
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        <gco:CharacterString>As the survey methods described and used herein are also implemented as part of the NOAA National Coral Reef Monitoring Program (NCRMP) an ecosystem-scale interdisciplinary coral reef monitoring program. The data from Timor-Leste are directly comparable to and informed by data collected by NOAA-ESD throughout the U.S. Pacific Islands and Territories. Furthermore, the methods used for establishing ecological baselines for climate change in Timor-Leste (Chapter 4) are being adopted and implemented at 21 sites across eight member states of the Intergovernmental Oceanographic Commission within the Western Pacific (WESTPAC) region. These data provide a foundation for comparing the ecological baselines under current and future stresses associated with climate change in the Coral Triangle region.</gco:CharacterString>
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            <gco:CharacterString>Prior to processing the calcification accretion unit (CAU) samples, laboratory analysts are trained to properly use relevant lab equipment (analytical balance, vacuum filtration pump, etc.) and are familiarized with the data entry tool/spreadsheet. Laboratory analysts are also required to go through the CAU Processing Standard Operating Procedure and other training materials.</gco:CharacterString>
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            <gco:CharacterString>The calcification rate and ratio of calcified materials to fleshy materials are determined for each Calcification Accretion Unit (CAU) recovered by the PIFSC Ecosystem Sciences Division (ESD). Scripps Institution of Oceanography (Scripps) staff may conduct additional analyses of specific units to determine functional group coverage and to determine species recruitment rates based on the results of analyzed photos collected during the unit recovery and disassembly process.

Additionally, data from the CAUs processed in 2012 that do not meet the processing criteria set in 2012 - that is, if the difference between the final two subsequent dry weights exceeds 0.2 grams, then those data have been omitted from the final dataset described herein.</gco:CharacterString>
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            <gco:CharacterString>The sampling procedure is based on the protocols developed by Price et al. 2012. While this project followed the same overall protocols, slight modifications were made after the first set of recovered Calcification Accretion Units (CAUs) were processed in 2012. Specifically, the following changes were implemented in 2013: 1) camera settings (adjusted to fit laboratory light conditions), and 2) use of freshwater in lieu of seawater during plate photo-documentation (seawater was not readily available in the new facility). Further, the processing procedures were also modified in 2013 such that the acceptable criteria for samples to be considered completely dry was set to 0.1 grams instead of 0.2 grams - that is, if two subsequent dry weights do not fall within the identified acceptable range (0.1 grams), the drying process will continue until this criteria is met.</gco:CharacterString>
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            <gco:CharacterString>Assembled calcification accretion units (CAUs) are attached to the benthos using stainless steel threaded rods. Five CAUs are deployed in roughly 15m depths at permanent monitoring sites established by the NOAA Fisheries, Ecosystem Sciences Division. Calcareous organisms, primarily crustose coralline algae and encrusting corals, recruit to these CAUs and accrete/calcify carbonate skeletons over 3 year deployments. Once recovered from the seafloor, the CAUs are processed to provide estimates of net calcification. CAUs have been deployed and replaced at existing, long-term monitoring sites during National Coral Reef Monitoring Program (NCRMP) cruises, in accordance with protocols developed by Price et al. 2012.</gco:CharacterString>
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                <gco:CharacterString>CALCIFICATION ACCRETION UNIT (CAU) ASSEMBLY, DEPLOYMENT and RECOVERY

CAUs are composed of two 10 x 10 centimeter (cm) flat, square, gray PVC plates, stacked 1 cm apart.

Five CAU units are deployed per site on individual stainless steel stakes driven into the substrate. The units are deployed in a clustered group with the spacing between each unit being 0.5 to 5 meters. CAU sites are situated at an average depth of 15 meters. Units are placed so the CAU plates are ~10 cm above the surface substrate and the top of the CAU plate is parallel to the surface of the water.

CAU units are recovered from the seafloor 2 to 3 years after deployment. Refer to the data files for the individual CAU site to determine the exact deployment time of a specific unit.

Refer to the Calcification Accretion Unit (CAU) Assembly, Deployment, and Recovery Standard Operating Procedure (2015) for a detailed description of the protocols.</gco:CharacterString>
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                <gco:DateTime>2015-08-01T00:00:00</gco:DateTime>
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                    <gco:CharacterString>Weible, Rebecca M</gco:CharacterString>
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                <gco:CharacterString>CALCIFICATION ACCRETION UNIT (CAU) LABORATORY ANALYSIS

Once CAU units are recovered they are disassembled and each plate is rinsed with freshwater to remove loose sediment, sand and mobile fauna. The plates are photographed and individual images are captured of the Upper Plate, Top Side; Upper Plate, Bottom Side; Lower Plate, Top Side; Lower Plate, Bottom Side. These images can be analyzed to determine benthic composition on each plate surface. If pieces of calcified material fall off during the photographing process, the pieces are retained with the plate for the dissolution process.

After the plates have been photographed they are rinsed with fresh water and placed on a pre-weighed drying plate along with any dislodged pieces, and left to begin drying at room temperature for 24 hours and to allow excess water to be removed. The drying plate assembly is then placed in the oven to dry at 60 degrees Celsius. If the difference in weights is less than 0.2 grams, the plates are considered dry and no further drying/weighing is required. If the difference in weights is greater than 0.2 grams the drying/reweighing process is repeated for as many 24-hour cycles as needed to obtain a difference of less than 0.2 grams. It should be noted that since the initial sample processing in 2012, the standard weighing protocol has since been improved such that the acceptable weight difference is 0.1 grams.

Once the plates are dry, each plate is placed in 5-10% Hydrochloric Acid (HCl) solution to dissolve the calcium carbonate materials. The plate is scraped to remove all materials and rinsed with the dilute HCl solution. The plate is then placed in the oven at 60 degrees Celsius to dry for 24 hours before the dry plate is obtained. Through the entire dissolution process all dilute HCl rinse solution is preserved for later filtering.

The dilute HCl rinse process is repeated on all materials removed from the plate until the dissolution process has stopped and all calcium carbonate material has been removed. The fleshy material and used dilute HCl rinse materials are then separated using a vacuum filtration pump by pouring the solution into a Buchner funnel, mesh layer and pre-weighed filter paper. The filter paper and fleshy material are then dried and weighed to determine the weight of fleshy algae present on each plate. The weight of calcified materials on each plate is determined by difference, where the initial weight of the dried plate (prior to the dissolution process) minus the fleshy material weight equals the weight of carbonate material dissolved. The resulting calcification rates are reported in units of grams/area/time.

Refer to the Calcification Accretion Unit (CAU) Laboratory Analysis Standard Operating Procedure (2015) for a detailed description of the protocols.</gco:CharacterString>
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              <gmd:dateTime>
                <gco:DateTime>2015-09-01T00:00:00</gco:DateTime>
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                    <gco:CharacterString>Weible, Rebecca M</gco:CharacterString>
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                    <gco:CharacterString>Calcification Accretion Unit (CAU) Assembly, Deployment, and Recovery Standard Operating Procedure (2015)</gco:CharacterString>
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                        <gco:Date>2015-08-01</gco:Date>
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